BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B10SP1|AL426327
(775 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1546 1512 0.0
>3x_Contig1546
Length = 12922
Score = 1512 bits (761), Expect = 0.0
Identities = 770/775 (99%)
Strand = Plus / Plus
Query: 1 acacaatattggattacgcaaggrtttgcattgcaacgaaaatatagcagagtaacacac 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 194 acacaatattggattacgcaaggatttgcattgcaacgaaaatatagcagagtaacacac 253
Query: 61 ccttgagatagccaatcgatcatgattaccaaaccagtggcacttccactccatacatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccttgagatagccaatcgatcatgattaccaaaccagtggcacttccactccatacatca 313
Query: 121 tcgtacaattcacccaaaagattgatgagacctcccagcacaccaaatctaagaacttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tcgtacaattcacccaaaagattgatgagacctcccagcacaccaaatctaagaacttca 373
Query: 181 tcaacagtaaggccaagatcaacttcctcgtcatcttcgagtcaatgttcttcaccagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcaacagtaaggccaagatcaacttcctcgtcatcttcgagtcaatgttcttcaccagca 433
Query: 241 agaagttcttctacgaaggccgcttctccaattcgtggcgggagaagttcataccagggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agaagttcttctacgaaggccgcttctccaattcgtggcgggagaagttcataccagggt 493
Query: 301 accatttcggtaggggtaagaatcaagcctactcatggaaaacaagattcttggcacgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 accatttcggtaggggtaagaatcaagcctactcatggaaaacaagattcttggcacgta 553
Query: 361 aatracaactccattattcatgaagagtttggggaatttaacttcgaccatgttttcagt 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aataacaactccattattcatgaagagtttggggaatttaacttcgaccatgttttcagt 613
Query: 421 ccggagatgaataacgatcgagtatatgagactatggcattgcctatgatagataaatta 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 614 ccggagatgaataacgatcgagtatatgacactatggcattgcctatgatagataaatta 673
Query: 481 ttcgagggatttaattgtacaattttcgcttatggtatgactggttcaggtaagacatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttcgagggatttaattgtacaattttcgcttatggtatgactggttcaggtaagacatat 733
Query: 541 accatgagtggrtccaaatcaggtcctggtataatacccatgtgcgttgacactattttc 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 accatgagtggatccaaatcaggtcctggtataatacccatgtgcgttgacactattttc 793
Query: 601 gatcgtatcaatgtgggattacctcgcaaaaagtttactgtcagagtatcctatttggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gatcgtatcaatgtgggattacctcgcaaaaagtttactgtcagagtatcctatttggaa 853
Query: 661 atttacaacgagagaatatttgatctattgaatttaccacagggcaaaactttaaatagc 720
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 854 atttacaacgagagaatatttgaactattgaatttaccacagggcaaaactttaaatagc 913
Query: 721 aatattatggtgcccagttcgacattgactaatgatcttaagcttcgagatgact 775
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 aatattatggtgcccagttcgacattgactaatgatcttaagcttcgagatgact 968
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4934
Number of Sequences: 1807
Number of extensions: 4934
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 775
length of database: 10,358,551
effective HSP length: 16
effective length of query: 759
effective length of database: 10,329,639
effective search space: 7840196001
effective search space used: 7840196001
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)